{
  "_id": "6a33a31d3efcd9bda43a9488",
  "Package": "YPmodel",
  "Type": "Package",
  "Title": "The Short-Term and Long-Term Hazard Ratio Model for Survival\nData",
  "Version": "1.4",
  "Date": "2020-10-15",
  "Author": "Junlong Sun and Song Yang",
  "Maintainer": "Junlong Sun <junlong.sun@gmail.com>",
  "Description": "Inference procedures accommodate a flexible range of\nhazard ratio patterns with a two-sample semi-parametric model.\nThis model contains the proportional hazards model and the\nproportional odds model as sub-models, and accommodates\nnon-proportional hazards situations to the extreme of having\ncrossing hazards and crossing survivor functions. Overall, this\npackage has four major functions: 1) the parameter estimation,\nnamely short-term and long-term hazard ratio parameters; 2) 95\npercent and 90 percent point-wise confidence intervals and\nsimultaneous confidence bands for the hazard ratio function; 3)\np-value of the adaptive weighted log-rank test; 4) p-values of\ntwo lack-of-fit tests for the model. See the included\n\"read_me_first.pdf\" for brief instructions. In this version\n(1.1), there is no need to sort the data before applying this\npackage.",
  "License": "GPL (>= 3)",
  "Repository": "https://junlongsun.r-universe.dev",
  "Date/Publication": "2020-10-21 01:20:39 UTC",
  "RemoteUrl": "https://github.com/junlongsun/ypmodel",
  "RemoteRef": "HEAD",
  "RemoteSha": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-18 07:46:17 UTC",
    "User": "root"
  },
  "MD5sum": "6f0f0c0f04a7d65af1a3f96c2d3fc1c0",
  "_user": "junlongsun",
  "_type": "src",
  "_file": "YPmodel_1.4.tar.gz",
  "_fileid": "1d99288027a6b9e9db1a973303970460e785ca13127428ed80c613b94e66c278",
  "_filesize": 892888,
  "_sha256": "1d99288027a6b9e9db1a973303970460e785ca13127428ed80c613b94e66c278",
  "_created": "2026-06-18T07:46:17.000Z",
  "_published": "2026-06-18T07:49:49.028Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 82079978232,
      "time": 107,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7717209738"
    },
    {
      "job": 82079978250,
      "time": 81,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7717200073"
    },
    {
      "job": 82079978200,
      "time": 183,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7717225776"
    },
    {
      "job": 82079978230,
      "time": 131,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7717211063"
    },
    {
      "job": 82079635645,
      "time": 123,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7717170140"
    },
    {
      "job": 82079978211,
      "time": 80,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7717199841"
    },
    {
      "job": 82079978294,
      "time": 68,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7717195506"
    },
    {
      "job": 82079978280,
      "time": 58,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7717192906"
    },
    {
      "job": 82079978305,
      "time": 68,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7717195617"
    }
  ],
  "_buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/junlongsun/ypmodel",
  "_commit": {
    "id": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
    "author": "junlongsun <junlongsun@users.noreply.github.com>",
    "committer": "junlongsun <junlongsun@users.noreply.github.com>",
    "message": "Update to 1.4\n",
    "time": 1603243239
  },
  "_maintainer": {
    "name": "Junlong Sun",
    "email": "junlong.sun@gmail.com",
    "login": "junlongsun",
    "description": "",
    "uuid": 8230364
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    }
  ],
  "_owner": "junlongsun",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "junlongsun",
      "count": 18,
      "uuid": 8230364
    }
  ],
  "_userbio": {
    "uuid": 8230364,
    "type": "user",
    "name": "junlongsun",
    "followers": 0
  },
  "_downloads": {
    "count": 180,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/YPmodel"
  },
  "_devurl": "https://github.com/junlongsun/ypmodel",
  "_searchresults": 18,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/YPmodel.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/junlongsun/ypmodel",
  "_realowner": "junlongsun",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0",
      "date": "2013-07-11"
    },
    {
      "version": "1.1",
      "date": "2014-02-17"
    },
    {
      "version": "1.2",
      "date": "2015-09-22"
    },
    {
      "version": "1.3",
      "date": "2015-11-09"
    },
    {
      "version": "1.4",
      "date": "2020-10-20"
    }
  ],
  "_exports": [
    "fun.adlgrk",
    "fun.classCheck",
    "fun.cumsum",
    "fun.errorMessage",
    "fun.flipud",
    "fun.generateParameters",
    "fun.hazardRationEstimation",
    "fun.hcvxitr1",
    "fun.internalParameters",
    "fun.martint",
    "fun.newBest",
    "fun.ntitr0",
    "fun.oldp2",
    "fun.Rjudge",
    "fun.survf",
    "fun.variance",
    "fun.YPmodelOriginal",
    "fun.zeroORone",
    "plot.YPmodel",
    "plot.YPmodel.estimate",
    "plot.YPmodel.IntervalBands",
    "plot.YPmodel.lackfittest",
    "plot.YPmodel.martint",
    "plot.YPmodel.survf",
    "plot.YPmodel.survivor",
    "print.YPmodel",
    "summary.YPmodel",
    "summary.YPmodel.adlgrk",
    "summary.YPmodel.estimate",
    "summary.YPmodel.IntervalBands",
    "summary.YPmodel.lackfittest",
    "summary.YPmodel.overall",
    "YPmodel",
    "YPmodel.adlgrk",
    "YPmodel.default",
    "YPmodel.estimate",
    "YPmodel.inputData",
    "YPmodel.IntervalBands",
    "YPmodel.lackfittest",
    "YPmodel.setParameter",
    "YPmodel.setRandom"
  ],
  "_datasets": [
    {
      "name": "gastric",
      "title": "Data from Gastrointestinal Tumor Study Group",
      "object": "gastric",
      "file": "gastric.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "V1",
        "V2",
        "V3"
      ],
      "rows": 90,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "YPmodel-package",
      "title": "The short-term and long-term hazard ratio model for survival data",
      "topics": [
        "YPmodel-package"
      ]
    },
    {
      "page": "gastric",
      "title": "Data from Gastrointestinal Tumor Study Group",
      "topics": [
        "gastric",
        "gastric30"
      ]
    },
    {
      "page": "YPmodel",
      "title": "A main function of package of model of short-term and long-term hazard ratio for survival data",
      "topics": [
        "plot.YPmodel",
        "print.YPmodel",
        "summary.YPmodel",
        "YPmodel",
        "YPmodel.default"
      ]
    },
    {
      "page": "YPmodel-internal",
      "title": "Internal functions for Model of short-term and long-term hazard ratio for survival data",
      "topics": [
        "fun.adlgrk",
        "fun.classCheck",
        "fun.cumsum",
        "fun.errorMessage",
        "fun.flipud",
        "fun.generateParameters",
        "fun.hazardRationEstimation",
        "fun.hcvxitr1",
        "fun.internalParameters",
        "fun.martint",
        "fun.newBest",
        "fun.ntitr0",
        "fun.oldp2",
        "fun.Rjudge",
        "fun.survf",
        "fun.variance",
        "fun.YPmodelOriginal",
        "fun.zeroORone",
        "summary.YPmodel.overall",
        "YPmodel-internal",
        "YPmodel.inputData",
        "YPmodel.setParameter",
        "YPmodel.setRandom"
      ]
    },
    {
      "page": "YPmodel.adlgrk",
      "title": "Adaptively weighted logrank test",
      "topics": [
        "summary.YPmodel.adlgrk",
        "YPmodel.adlgrk"
      ]
    },
    {
      "page": "YPmodel.estimate",
      "title": "YPmodel Estimate Parameters.",
      "topics": [
        "plot.YPmodel.estimate",
        "plot.YPmodel.survivor",
        "summary.YPmodel.estimate",
        "YPmodel.estimate"
      ]
    },
    {
      "page": "YPmodel.IntervalBands",
      "title": "Beta confidential intervals & bands",
      "topics": [
        "plot.YPmodel.IntervalBands",
        "summary.YPmodel.IntervalBands",
        "YPmodel.IntervalBands"
      ]
    },
    {
      "page": "YPmodel.lackfittest",
      "title": "Martingale residual-based & contrast-based lack-of-fit tests",
      "topics": [
        "plot.YPmodel.lackfittest",
        "plot.YPmodel.martint",
        "plot.YPmodel.survf",
        "summary.YPmodel.lackfittest",
        "YPmodel.lackfittest"
      ]
    }
  ],
  "_rundeps": [],
  "_score": 2.255272505103306,
  "_indexed": true,
  "_nocasepkg": "ypmodel",
  "_universes": [
    "junlongsun"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.4",
      "date": "2026-06-18T07:48:07.000Z",
      "distro": "noble",
      "commit": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
      "fileid": "729db362dcce17c92a772db8cc1908317f1ab8fef46cc64d9b6e8870450a87ea",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.4",
      "date": "2026-06-18T07:47:41.000Z",
      "distro": "noble",
      "commit": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
      "fileid": "23a2077af2dfb4c242a56ff7864fec50573946d800d7076af1adbc18aed0f192",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.4",
      "date": "2026-06-18T07:48:56.000Z",
      "commit": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
      "fileid": "af01104629ae358243be2bd711c687db776e6fa9c0cd016ff0abf37cf1134708",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.4",
      "date": "2026-06-18T07:48:13.000Z",
      "commit": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
      "fileid": "641f8f7885d67565ac18d661731652d1a62ab9dd08ed0f653d70f8340cdf856b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.4",
      "date": "2026-06-18T07:47:52.000Z",
      "commit": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
      "fileid": "86b4f529c36bcc31b2bb69e522fa89567a15808bce2210d56357bfa638c670e8",
      "status": "success",
      "buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.4",
      "date": "2026-06-18T07:47:22.000Z",
      "commit": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
      "fileid": "d0ac69a986754ffdc085bdd3c332f10ec714ea7ce386c25dafe36b8761d2931c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.4",
      "date": "2026-06-18T07:47:16.000Z",
      "commit": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
      "fileid": "86927cec3e0fdb83c39438fc5917838f747b089ee979b2418c082a556d578597",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.4",
      "date": "2026-06-18T07:47:19.000Z",
      "commit": "ce7f466103b1d89d95ac739d77f576b21f7f10ff",
      "fileid": "2f13b137e167693131de14839e987a5054f76d497dec8a095a89b1c37c388885",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/junlongsun/actions/runs/27744550471"
    }
  ]
}